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Get ready for your new favorite sweet treat: Healthy Lemon Cookies. These vegan, gluten-free goodies make wonderful mid-day or late night snacks. Made with almond flour, maple syrup, and lemon zest, they’re absolutely heavenly!

A delicious lemon cookie recipe
Every once in a while I find myself in the mood for a fruity, sugary treat. When these cravings strike, it’s usually citrusy fruits that are on my mind! Last week, I found myself in the mood for a lemon something, and I decided to try my hand at creating a healthy lemon cookie recipe.
I searched the internet only to find that pretty much all lemon cookie recipes contain butter and granulated sugar… and more butter and granulated sugar. Seeing as I’m not a huge fan of using these ingredients and love to go the healthy, all-natural route, I knew I had a challenge on my hands!
I got to work and blended a combination of almond and coconut flour, baking soda, coconut oil, maple syrup, vanilla, and salt. I added a bit of lemon juice and zest, and after a few trial and error attempts, I found myself with healthy lemon cookies that are absolutely out of this world!
These are the perfect treat to serve up this spring. Since they’re gluten-free and vegan-friendly, they’re great for taking to gatherings or girl’s nights! You’re going to love these delicious gluten-free lemon cookies.
If you are in the fruity mood like me, you should make my Easy Apple Galette next.

Ingredients for making gluten-free cookies
We will be using all vegan ingredients to create our lemon zest cookies. Almond and coconut flour help to create the batter, in addition to coconut oil, maple syrup, and baking soda. We’ll also be using lemons, of course! When the cookies are finished baking, we will be topping them with a delicious 3-ingredient glaze.
Here are all of the ingredients you’ll need to make this recipe:
Cookies:
- Almond flour
- Coconut flour
- Baking soda
- Salt
- Melted coconut oil
- Maple syrup
- Lemon juice
- Lemon zest
- Vanilla
Glaze:
- Powdered sugar
- Lemon juice
- Lemon zest

What you’ll need to make this lemon cookie recipe
To make this lemon dessert, there are a number of kitchen tools that you’ll need to have ready.
- Baking sheet
- Parchment paper
- Two mixing bowls
- Stirring spatula
- Whisk
- Knife or spatula for glazing
How to make healthy lemon cookies
Gluten-free lemon cookies are made by baking dough into round, flat disc shapes and topping with a tangy glaze. These are the perfect snack to serve this spring! Take them into work for a vegan treat that everyone will love.
To start making healthy cookies, preheat the oven to 350F and line a baking sheet with parchment paper.
Next, in a large bowl, mix the almond flour, coconut flour, baking soda, and salt.
In a small bowl, whisk the coconut oil, maple syrup, lemon juice, lemon zest, and vanilla.
Then, add the wet ingredients to the dry and stir until well combined.
Place the mixture in the refrigerator to chill for 30 minutes. After 30 minutes, roll the dough into individual balls and flatten slightly on a baking sheet.
Bake for 12-15 minutes or until golden brown.
Meanwhile, make the glaze by combining the powdered sugar, lemon juice, and lemon zest. Once the cookies have completely cooled, top them with the glaze.
Finally, serve and enjoy!

Tips and tricks for making healthy lemon cookies
Want to make the perfect lemony cookies? Here are some tips that will help you do so!
Can I use lemon extract instead?
Though I haven’t tried this method, I imagine that it would work just fine in this recipe. Since extract is stronger and more concentrated than fruit juice, you shouldn’t need as much extract as you would juice. Try starting with a teaspoon or two, and add more as needed.
Don’t use too much or too little flour
Cookie ingredients are carefully measured to ensure that the cookies bake properly. Too much flour can make for hard, dense cookies. For this reason, it’s important to follow the instructed measurements to a tee!
Do not measure flour by scooping your cup directly into the bag. Instead, use a fork to gently fluff the flour prior to measuring it out. Then, take a spoon and lightly drop the flour into your measuring cup. Do not pat it down. Once the cup is full, level off the top. Now you have the perfect amount of flour!
How to store lemon cookies
These treats can be kept on the counter, or they can be refrigerated. Either way, be sure to keep them in a tightly sealed container so that they remain fresh for as long as possible. Eat within 5-6 days.
How to make and freeze cookies ahead of time
These cookies can be made ahead of time and frozen for enjoying at a later date. If you choose to go this route, simply store completed cookies in an airtight container and remove 2-3 hours prior to eating, ensuring that they’re fully thawed. Eat frozen cookies within 2 months.

Are these cookies diet friendly?
I don’t know about all lemon cookies, but these certainly are! When making these cookies, I used a handful of ingredients with higher levels of nutrients than their commonly used counterparts. The result? Wholesome, lemony cookies that are just as nutritious as they are delicious!
Here are some of the ingredients that help these cookies fit into a healthy lifestyle:
- Almond flour: Almond flour is my go-to baking flour because it’s filled with protein and fiber. A serving of this flour provides over 30% of the needed daily amount of vitamin E and manganese, making it a great source!
- Coconut flour: Similarly, coconut flour is also a great source of protein and fiber. It’s known to aide in healthy digestion and blood sugar, and it’s also gluten-free!
- Coconut oil: I like to use coconut oil in place of regular oils such as avocado, almond, canola, or olive. Plus, it’s great for cholesterol, blood sugar, blood pressure, and more!
- Maple syrup: As I mention in pretty much all of my baking recipes, maple syrup is my BFF for using as an all-natural sweetener. It makes my baked goodies taste perfectly sweet and delicious while eliminating the need to use granulated sugar!
These cookies do not include commonly used lemon cookie ingredients such as all-purpose flour, butter, granulated sugar, or eggs. In fact, these are actually 100% vegan lemon cookies!
Try these lemon treats too!
Are you a lemon lover? If so, we’ve certainly got some yummy recipe ideas for you! Have these lemon-filled snacks on hand for delicious and easy treats throughout the day. In my experience, they make great, healthy late night snacks too! They’re perfect for when hunger hits during late Netflix binges.
P.S. I threw in a lemon hummus recipe because why not?!
- Gluten-Free Lemon Poppy Seed Bread
- Healthy Lemon Bars (Gluten-Free)
- Healthy Lemon Poppy Seed Muffins
- Paleo Lemon Blueberry Muffins
- Lemon Garlic Hummus

Healthy Lemon Cookies (Gluten-Free)
Get ready for your new favorite sweet treat: Healthy Lemon Cookies. These vegan, gluten-free goodies make wonderful mid-day or late night snacks. Made with almond flour, maple syrup, and lemon zest, they’re absolutely heavenly!
Ingredients
Cookie:
- 1 3/4 cup almond flour
- 1/4 cup coconut flour
- 1 tsp baking soda
- 1/8 tsp salt
- 1/3 cup melted coconut oil
- 1/3 cup maple syrup
- 2 tbsp lemon juice
- 1 tbsp lemon zest
- 1 tsp vanilla
Glaze:
- 1 cup powdered sugar
- 2 tbsp lemon juice
- 2 tbsp lemon zest
Instructions
- Preheat oven to 350F and line baking sheet with parchment paper.
- In a large bowl, mix together almond flour, coconut flour, baking soda, and salt.
- In a small bowl, whisk together coconut oil, maple syrup, lemon juice, lemon zest and vanilla.
- Add wet ingredients to dry ingredients and stir until combined.
- Place in refrigerator to chill for 30 minutes. After 30 minutes, roll into balls and flatten slightly onto baking sheet. They won’t spread much so form into desired shape.
- Bake for 14-16 minutes or until golden brown.
- Meanwhile, make the glaze by combining all of the ingredients. Once cookies have completely cooled, top with glaze.
- Enjoy! Store on counter or in refrigerator.
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Rachel says
Love love love!!! So good!! Didn’t have any lemon zest but followed everything else exactly and they were perfect!
Erin says
Hi Rachel! Thanks so much for your kind words! I am so happy you liked them!
Adrienne says
Delish! I’ve already made two batches. Thank you for sharing.
Erin says
Hi Adrienne, thank you so much for your kind words! Happy you love them!
Lilia says
Ohhhhhmyyygoooosh! Bright, chewy, tangy, sweet – the best lemon cookies ever (GF or not!)
Erin says
Hi Lila, thank you so much for your kind words! I am so happy you liked them!
Ashley Borjeson says
Love this recipe! I will Definitely be making these again and doubling the recipe so I can “hopefully” freeze soMe. Thank you 🙂
Erin says
Hi Ashley! Thank you so much for your kind words! So happy you enjoyed them!
Katie M says
My most favorite cookie EVER!!
Erin says
Hi Katie! I’m thrilled you love them!
Kathleen says
When I was making these with no sugar or egg or butter I was a little hesitant (as was my family) but they are delicious! My celiac son loves them and I will be making them weekly! Might change it up to orange sometimes too. But will definitely be a new staple! Than you!
Erin says
Hi Kathleen! I am so happy your family enjoys them!! 🙂
aimee says
Just made these they are delicious! I love anything lemon!
Erin says
Hi Aimee! I am so happy you love them! 🙂
Allie says
I just made these and WOW they are incredible!!!
Erin says
Hi Allie! Thank you so much! Glad you liked them!!
Camellia Heart says
These tasted sooo delicious!
For the glaze, ours came out pretty translucent and liquid-y. Any tips??
Erin says
Hi Camellia, thanks for your kind words! Next time I would add more powdered sugar. Let me know how they come out next time!
Jordan says
Hi. I can only get my hands on regular flour. How much should I use? Equal replacement?
Erin says
Hi Jordan, yes, you can use regular flour instead. Just check the ratio for the specific flour you chose since not all flour ratios are 1:1. Let me know how they come out!
Mi Na Lee says
Just made these and they taste amazing even without the frosting. They smell like the lemon girl scout cookies. They are a tad crumbly but I think it’s cause my almond flour wasn’t very smooth. Overall it was so easy to put together.
Erin says
Hi Mi Na, thank you for your kind words! I am happy you liked them!
Sydney says
Can you sub in any other types of flour for the almond flour?:)
Erin says
Hi Sydney! Yes, you can use a different flour. Before you bake just be sure to check the ratio because some flours are not a 1:1 ratio. Let me know what flour you use and how it comes out!
Nicola says
Can you recommend another flour other than almond? Could you do all coconut? Thanks!
Erin says
Hi Nicole! Yes, you can use a different flour. Before you bake just be sure to check the ratio because some flours are not a 1:1 ratio. Let me know what flour you use and how it comes out!
SamanthaB says
OMGOODNESS! Making these ASAP!
Erin says
Hi Samantha! Thank you! Let me know how yours come out! 🙂
Melanie says
Came out so yummy! Chewy, slightly coconutty, very lemony! So good!
Erin says
Hi Melanie, I am thrilled you love them!!
Mary Lawrence says
These are so yummy! Had to use olive oil (out of coconut oil) and they are still delicious.
Erin says
Hi Mary, I am so glad you enjoyed the cookies!!
Melissa says
Can’t do coconut (oil & flour) any subs?
Erin says
any oil or butter works. add more almond flour.
Melissa says
Thank you!
Erin says
You’re welcome!! How did it come out?
Melissa says
Haven’t tried yet. Couldn’t find almond flour 😅. Can I sub honey instead of maple syrup?
Erin says
Hi Melissa, oh no! You can use any flour if almond isn’t available. Just check the ratio before you use it since most are 1:1. Yes, you can use honey!! Hope you can make them soon!
Claire says
Could you substitute oat flour for the 2 flours you have listed?
Erin says
i dont love oat flour in cookies without any oats, but you could try!
Meghan says
Is coconut flour necessary or can you substitute using only almond flour?
Erin says
you can make them using all almond and more of it (maybe 1/2 cup more) but they will be softer. the coconut flour gives them a firm cookie feel.
Kim Donnelly says
What could be used in place of maple syrup? But not honey either. What to get the carbs lower
Erin says
any low carb sweetener? agave? I am not familiar but you need liquid sweetener!
B says
Love this recipe.
I substituted the almond flour for oat flour and they still turned out to be delicious.
Thank you.
Erin says
Hi B, I am so happy you enjoyed them and made them your own!!
Michelle says
This is what I did! I only had 3/4 cup of almond flour so I used oat flour for the rest. I’m so glad that it does work yummily with oat flour because they’re a lot more accessible and cheaper than almond flour! I didn’t have lemon zest so I used lemon extract instead! Lemony good! Thank you for a wonderful recipe!
Michelle says
Oh I forgot to mention that I subbed agave syrup for the maple
Michelle says
I love this recipe so much! For our church outdoor service on Sunday, I am leaning towards this recipe vs one that uses APF. There’s 2 baking times though. One up there says 12-15 and the instructions say 14-16. I baked my second pan only 13 minutes because the first one baked for 14 minutes were dark on top and very dark on the bottom. Still tastes fine but at first, I thought I burned my cookies!
Erin says
Hi Michelle, so glad you liked them!!
Erin says
Hi Michelle, thanks so much for sharing and so glad you liked them!
Living.poquitaloquita says
I used 1/4 c brown sugar swerve and mixed it into the wet ingredients.
Sarah says
My go to liquid sweetener when trying to make a recipe lower calorie is sugar free syrup. I haven’t used it in this recipe but it’s worked for me before in different recipes!