• Skip to primary navigation
  • Skip to main content
  • Skip to primary sidebar
freebie! download my top 8 dessert recipe ebook

Join my newsletter for latest recipes!

Erin Lives Whole

Healthy Eats + Delicious Treats

  • Recipe Index
    • Course
      • Appetizers
      • Breakfast
      • Lunch & Dinner
      • Dessert
      • Soup
      • Sides
      • Drinks
      • Snacks
      • Sauces & Dips
    • Dessert Type
      • Bars & Balls
      • Breads & Muffins
      • Brownies
      • Cakes
      • Candy
      • Cookies
      • Frozen
      • Pie & Cobbler
      • Other
    • Diet
      • Dairy-Free
      • Gluten-Free
      • Nut-Free
      • Paleo Friendly
      • Vegan
      • Vegetarian
    • Method
      • 30 Minute or Less
      • Air Fryer
      • Grill
      • Instant Pot
      • Meal Prep
      • No Bake
      • One Pot/Pan
      • Oven
      • Stove Top
    • Season
      • Fall
      • Holiday
      • Winter
      • Spring
      • Summer
    • Recipe Filter
    • All Recipes
  • Ebooks
  • Shop
  • Lifestyle
  • About
    • Work With Me
    • Contact
  • Subscribe to receive latest recipes

    Join my newsletter for latest recipes!

  • Browse by Diet
    • Gluten-Free
    • Dairy-Free
    • Nut-Free
    • Paleo Friendly
    • Vegan
    • Vegetarian
  • Breakfast
  • Lunch & Dinner
  • Drinks
  • Snacks
  • Dessert
  • Appetizers
Home Recipes By Meal Dessert

Healthy Lemon Cookies (Gluten-Free)

57 Reviews Recipe
gf df
By: Erin Antoniak • Updated On March 1, 2023

This post may contain affiliate links. Please read my disclosure policy.

Get ready for your new favorite sweet treat: Healthy Lemon Cookies. These vegan, gluten-free goodies make wonderful mid-day or late night snacks. Made with almond flour, maple syrup, and lemon zest, they’re absolutely heavenly!

lemon cookies

A delicious lemon cookie recipe

Every once in a while I find myself in the mood for a fruity, sugary treat. When these cravings strike, it’s usually citrusy fruits that are on my mind! Last week, I found myself in the mood for a lemon something, and I decided to try my hand at creating a healthy lemon cookie recipe.

I searched the internet only to find that pretty much all lemon cookie recipes contain butter and granulated sugar… and more butter and granulated sugar. Seeing as I’m not a huge fan of using these ingredients and love to go the healthy, all-natural route, I knew I had a challenge on my hands!

I got to work and blended a combination of almond and coconut flour, baking soda, coconut oil, maple syrup, vanilla, and salt. I added a bit of lemon juice and zest, and after a few trial and error attempts, I found myself with healthy lemon cookies that are absolutely out of this world!

These are the perfect treat to serve up this spring. Since they’re gluten-free and vegan-friendly, they’re great for taking to gatherings or girl’s nights! You’re going to love these delicious gluten-free lemon cookies.

If you are in the fruity mood like me, you should make my Easy Apple Galette next.

lemon cookies on tray

Ingredients for making gluten-free cookies

We will be using all vegan ingredients to create our lemon zest cookies. Almond and coconut flour help to create the batter, in addition to coconut oil, maple syrup, and baking soda. We’ll also be using lemons, of course! When the cookies are finished baking, we will be topping them with a delicious 3-ingredient glaze.

Here are all of the ingredients you’ll need to make this recipe:

Cookies:

  • Almond flour
  • Coconut flour
  • Baking soda
  • Salt
  • Melted coconut oil
  • Maple syrup
  • Lemon juice
  • Lemon zest
  • Vanilla

Glaze:

  • Powdered sugar
  • Lemon juice
  • Lemon zest
dipping lemon cookie in icing

What you’ll need to make this lemon cookie recipe

To make this lemon dessert, there are a number of kitchen tools that you’ll need to have ready.

  • Baking sheet
  • Parchment paper
  • Two mixing bowls
  • Stirring spatula
  • Whisk
  • Knife or spatula for glazing

How to make healthy lemon cookies

Gluten-free lemon cookies are made by baking dough into round, flat disc shapes and topping with a tangy glaze. These are the perfect snack to serve this spring! Take them into work for a vegan treat that everyone will love.

To start making healthy cookies, preheat the oven to 350F and line a baking sheet with parchment paper.

Next, in a large bowl, mix the almond flour, coconut flour, baking soda, and salt.

In a small bowl, whisk the coconut oil, maple syrup, lemon juice, lemon zest, and vanilla.

Then, add the wet ingredients to the dry and stir until well combined.

Place the mixture in the refrigerator to chill for 30 minutes. After 30 minutes, roll the dough into individual balls and flatten slightly on a baking sheet.

Bake for 12-15 minutes or until golden brown.

Meanwhile, make the glaze by combining the powdered sugar, lemon juice, and lemon zest. Once the cookies have completely cooled, top them with the glaze.

Finally, serve and enjoy!

Tips and tricks for making healthy lemon cookies

Want to make the perfect lemony cookies? Here are some tips that will help you do so!

Can I use lemon extract instead?
Though I haven’t tried this method, I imagine that it would work just fine in this recipe. Since extract is stronger and more concentrated than fruit juice, you shouldn’t need as much extract as you would juice. Try starting with a teaspoon or two, and add more as needed.

Don’t use too much or too little flour
Cookie ingredients are carefully measured to ensure that the cookies bake properly. Too much flour can make for hard, dense cookies. For this reason, it’s important to follow the instructed measurements to a tee!

Do not measure flour by scooping your cup directly into the bag. Instead, use a fork to gently fluff the flour prior to measuring it out. Then, take a spoon and lightly drop the flour into your measuring cup. Do not pat it down. Once the cup is full, level off the top. Now you have the perfect amount of flour!

How to store lemon cookies
These treats can be kept on the counter, or they can be refrigerated. Either way, be sure to keep them in a tightly sealed container so that they remain fresh for as long as possible. Eat within 5-6 days.

How to make and freeze cookies ahead of time
These cookies can be made ahead of time and frozen for enjoying at a later date. If you choose to go this route, simply store completed cookies in an airtight container and remove 2-3 hours prior to eating, ensuring that they’re fully thawed. Eat frozen cookies within 2 months.

Are these cookies diet friendly?

I don’t know about all lemon cookies, but these certainly are! When making these cookies, I used a handful of ingredients with higher levels of nutrients than their commonly used counterparts. The result? Wholesome, lemony cookies that are just as nutritious as they are delicious!

Here are some of the ingredients that help these cookies fit into a healthy lifestyle:

  • Almond flour: Almond flour is my go-to baking flour because it’s filled with protein and fiber. A serving of this flour provides over 30% of the needed daily amount of vitamin E and manganese, making it a great source!
  • Coconut flour: Similarly, coconut flour is also a great source of protein and fiber. It’s known to aide in healthy digestion and blood sugar, and it’s also gluten-free!
  • Coconut oil: I like to use coconut oil in place of regular oils such as avocado, almond, canola, or olive. Plus, it’s great for cholesterol, blood sugar, blood pressure, and more!
  • Maple syrup: As I mention in pretty much all of my baking recipes, maple syrup is my BFF for using as an all-natural sweetener. It makes my baked goodies taste perfectly sweet and delicious while eliminating the need to use granulated sugar!

These cookies do not include commonly used lemon cookie ingredients such as all-purpose flour, butter, granulated sugar, or eggs. In fact, these are actually 100% vegan lemon cookies!

Try these lemon treats too!

Are you a lemon lover? If so, we’ve certainly got some yummy recipe ideas for you! Have these lemon-filled snacks on hand for delicious and easy treats throughout the day. In my experience, they make great, healthy late night snacks too! They’re perfect for when hunger hits during late Netflix binges.

P.S. I threw in a lemon hummus recipe because why not?!

  • Gluten-Free Lemon Poppy Seed Bread
  • Healthy Lemon Bars (Gluten-Free)
  • Healthy Lemon Poppy Seed Muffins
  • Paleo Lemon Blueberry Muffins
  • Lemon Garlic Hummus
tray of lemon cookies
5 Stars 4 Stars 3 Stars 2 Stars 1 Star 5 from 57 reviews

Healthy Lemon Cookies (Gluten-Free)

Get ready for your new favorite sweet treat: Healthy Lemon Cookies. These vegan, gluten-free goodies make wonderful mid-day or late night snacks. Made with almond flour, maple syrup, and lemon zest, they’re absolutely heavenly!

Prep: 40 Cook: 15 Total: 55 minutes
Yield 16 cookies 1x
Scale
Print Pin it Rate

Ingredients

Cookie:

  • 1 3/4 cup almond flour
  • 1/4 cup coconut flour
  • 1 tsp baking soda
  • 1/8 tsp salt
  • 1/3 cup melted coconut oil
  • 1/3 cup maple syrup
  • 2 tbsp lemon juice
  • 1 tbsp lemon zest
  • 1 tsp vanilla

Glaze:

  • 1 cup powdered sugar
  • 2 tbsp lemon juice
  • 2 tbsp lemon zest

Instructions

  1. Preheat oven to 350F and line baking sheet with parchment paper.
  2. In a large bowl, mix together almond flour, coconut flour, baking soda, and salt.
  3. In a small bowl, whisk together coconut oil, maple syrup, lemon juice, lemon zest and vanilla.
  4. Add wet ingredients to dry ingredients and stir until combined.
  5. Place in refrigerator to chill for 30 minutes. After 30 minutes, roll into balls and flatten slightly onto baking sheet. They won’t spread much so form into desired shape.
  6. Bake for 14-16 minutes or until golden brown.
  7. Meanwhile, make the glaze by combining all of the ingredients. Once cookies have completely cooled, top with glaze.
  8. Enjoy! Store on counter or in refrigerator.
Author: Erin Antoniak Category: gluten-free, dessert Method: oven Cuisine: American Diet: Gluten Free
tray of lemon cookies

Did you make this?

Leave a comment below and tag @erinliveswhole on social media!

erinliveswhole

There may be affiliate links in this post! By purchasing a product I recommend, I may receive a small compensation. However, I only recommend products I absolutely love and use myself. Thank you for supporting Erin Lives Whole, it helps keep this blog afloat 🙂

You May Also Like...

  • lemon poppy seed bread
    Gluten Free Lemon Poppy Seed Bread
  • lemon bar with powdered sugar
    Healthy Lemon Bars (Gluten-Free)
  • holding a cookie
    Healthy Monster Cookies
  • lemon poppy seed muffin on rack with bite
    Healthy Lemon Poppy Seed Muffins
Previous Post
Next Post

Reader Interactions

Leave a Comment Cancel reply

Have a question? Use the form below to submit your question or comment. I love seeing what you made!

Recipe rating 5 Stars 4 Stars 3 Stars 2 Stars 1 Star

  1. Courtney says

    Posted on 1/4 at 1:45 pm

    My boyfriend and I literally ate 7 cookies each the first night I made these. We’re actually obsessed. Best lemon dessert we’ve ever had, and we LOVE a good lemon dessert.

    Reply
    • Erin says

      Posted on 1/4 at 3:53 pm

      Hi Courtney, so happy you both loved them!!

      Reply
  2. Jenny says

    Posted on 1/3 at 3:58 pm

    I’ve tried a lot of Erin Lives While recipes and this one is the most requested in my household. Delicious and fresh lemon flavor with healthier ingredients. Recommend leaving them in one more minute after you think they’re done. They’ll hold better and even have a crisp. So good!

    Reply
    • Erin says

      Posted on 1/4 at 1:47 pm

      Hi Jenny, I am so happy you love the cookies and thanks for your support!

      Reply
  3. Lucille says

    Posted on 1/3 at 3:56 pm

    So delicious! I’ve made them for girls night out or for just a good cookie fix at home .

    Reply
    • Erin says

      Posted on 1/4 at 1:45 pm

      Hi Lucille, thanks for sharing! 🙂

      Reply
  4. Sarah A says

    Posted on 1/3 at 3:23 pm

    These lemon cookies were a huge hit! Thank you Erin 🙂

    Reply
    • Erin says

      Posted on 1/4 at 1:28 pm

      Hi Sarah, glad everyone liked them!

      Reply
  5. Dora says

    Posted on 12/22 at 1:12 pm

    Hi :), I used wheat instead of almond flour (it wasn’t available) in a 1:1 ratio. The cookies are delicious. However, mine didn’t turn out lemony sour inside (without glazing). Do you think I should’ve put more lemon or they shouldn’t taste sour or maybe it has something to do with the flour?
    Thanks in advance
    (Excuse my English🙈, I’m not a native speaker)

    Reply
    • Erin says

      Posted on 12/23 at 12:43 pm

      Hi Dora, I am so glad you liked them, I’d suggest adding more lemon next time. Let me know if that helps and you speak/write beautifully! 🙂

      Reply
  6. Christina says

    Posted on 12/7 at 2:46 pm

    BEST. COOKIES. EVER!!! I make them at least once a month. They’re what I bring to every family gathering because my parents, sister, grandparents, and fiancé are all obsessed with them. They’re a staple in my house – and they’re so easy to make.

    * I have a tree nut allergy so I substitute 1 1/3 cup all purpose flour for her almond flour.

    Reply
    • Erin says

      Posted on 12/7 at 4:47 pm

      Hi Christina, I am so happy everyone loves them so much and you make them your own! 🙂

      Reply
  7. Sarah says

    Posted on 11/10 at 2:31 pm

    These are SO good! They have the perfect balance of sweetness and tartness from the lemon juice and zest. Mine ended up a little crumbly (it was probably my almond flour), but the glaze on top helped hold it all together. I’m definitely making them again for my friends and family who want a treat but something not too sweet!

    Reply
    • Erin says

      Posted on 11/10 at 3:01 pm

      Hi Sarah, I am thrilled everyone enjoyed the cookies. Maybe next time try a little less almond flour. They shouldn’t be crumbly. Let me know how they come out next time!

      Reply
  8. Stephanie says

    Posted on 9/18 at 11:31 am

    Made these cookies last night and of course they were amazing. It ended up being the juice from 1 lemon, but the zest from 2 so I’m glad I bought 2 lemons before making them. This was super easy and I love how I had all the ingredients at home. I think next time I may change it up and make a sweet flavored icing to go along with the lemon cookies!

    Reply
    • Erin says

      Posted on 9/20 at 11:11 am

      Hi Stephanie, thank you so much for your kind words! I am thrilled you loved the cookies!

      Reply
  9. Kirsten Simeone says

    Posted on 8/26 at 5:57 pm

    These are amazing!! So easy to make and taste delicious! I didn’t make the glaze but they are so delicious without them anyway! Thank you!

    Reply
    • Erin says

      Posted on 8/27 at 8:00 am

      Hi Kristen, thanks for your kind words! I am so happy you enjoyed them! Let me know if you make them again and try the glaze!

      Reply
  10. Miranda says

    Posted on 8/22 at 12:55 pm

    These are BOMB! SO good. Can’t say enough good things about them.

    Reply
    • Erin says

      Posted on 8/22 at 1:21 pm

      Hi Miranda, I am so happy you enjoyed them!!

      Reply
  11. Ariana says

    Posted on 8/19 at 9:49 am

    I made this recipe yesterday and all I kept saying while bitting into the cookie is “WOW!”. I love lemon cake/cookies and I am glad I was able to find a healthier alternative. 2 cookies calmed my sugary craving! Thank you for sharing this recipe. 🙂

    Reply
    • Erin says

      Posted on 8/19 at 1:47 pm

      Hi Ariana, I am thrilled you loved them so much! Thanks for your support!

      Reply
  12. Melissa says

    Posted on 7/6 at 8:40 pm

    I do t have access to almond flour and I can’t do coconut anything, can I use whole wheat or whole wheat pastry flour instead?

    Reply
    • Melissa says

      Posted on 7/6 at 8:41 pm

      Oops I meant don’t

      Reply
      • Erin says

        Posted on 8/2 at 11:25 pm

        Hi Melissa, yes you can use a different type of flour. Before you bake, I’d just recommend checking the ratio since all flours aren’t 1:1. Let me know what flour you make them with and how it goes!

  13. Ali Davidson says

    Posted on 6/24 at 1:59 pm

    These cookies are amazing! I used whole wheat flour instead of almond flour to make the recipe nut-free (allergy) and it worked out great.

    Reply
    • Joy says

      Posted on 7/9 at 12:58 pm

      Hi Ali! Did you use the same amount of whole wheat flour as almond flour? Did you also still use coconut flour?

      Reply
      • Melissa says

        Posted on 7/12 at 10:36 am

        I was wondering the same thing…I’m thinking she used 2 cups whole wheat to replace both the almond and coconut flour.

    • Erin says

      Posted on 8/3 at 9:37 pm

      Hi Ali, thank you for the kind words and so happy you made them your own! 🙂

      Reply
  14. Diane says

    Posted on 6/17 at 6:37 pm

    These were DELICIOUS! I love lemon anything! Followed it to a tee! Thank you for this and all your delicious recipes!

    Reply
    • Erin says

      Posted on 8/3 at 10:38 pm

      Hi Diane! I am so happy you love the cookies and thanks for your support!!

      Reply
  15. Rachel says

    Posted on 6/9 at 10:55 pm

    These are the best lemon cookies I’ve ever had. They are the perfect cookie with a crunchy outside and soft inside. My boyfriend begs me to make these every week

    Reply
    • Erin says

      Posted on 8/3 at 11:29 pm

      Hi Rachel! Thank you so much for your kind words! I am so happy you both like them!!

      Reply
  16. Natasha says

    Posted on 5/28 at 1:51 am

    These are amazing! Everyone that tried them (7 people!) loved them. I will make these again. Best gf cookie yet!

    Reply
    • Erin says

      Posted on 8/4 at 8:57 pm

      Hi Natasha! Thank you so much for your kind words! I am thrilled everyone enjoyed them! 🙂

      Reply
  17. Julia says

    Posted on 5/26 at 5:00 pm

    So perfect! They’re not too sweet, and have a wonderful texture and lemon flavor.

    Reply
    • Erin says

      Posted on 8/4 at 9:05 pm

      Hi Julia! Thank you so much for your kind words! I’m so happy you like them! 🙂

      Reply
  18. Jenny says

    Posted on 5/22 at 5:12 pm

    Love all your recipes but this was is AMAZING! So easy and fresh. The best summer dessert.

    Reply
    • Erin says

      Posted on 8/4 at 9:26 pm

      Hi Jenny! Thank you so much for your kind words and support! I’m so happy you enjoyed the cookies!

      Reply
  19. Erin N says

    Posted on 5/20 at 9:01 pm

    SO freaking GOOD!!! I cannot talk about these cookies enough. The perfect amount of chewy and softness. mmmmm

    Reply
    • Erin says

      Posted on 8/4 at 9:34 pm

      Hi Erin! Thanks for your kind words! I am so glad you like them!

      Reply
  20. Allie says

    Posted on 4/26 at 11:31 am

    What can be subbed in for almond flour to make them nut free? Thanks!!

    Reply
    • Erin says

      Posted on 8/5 at 12:36 am

      Hi Allie, yes, you can use a different flour. Before you bake just be sure to check the ratio because some flours are not a 1:1 ratio. Let me know what flour you use and how it comes out! 

      Reply
Older Comments
Newer Comments

Primary Sidebar

erin in front of a building

Hey there!

I’m Erin. Creator of Erin Lives Whole, a food blog with delicious and easy healthy recipes that will leave you feeling good. We’ve got everything from wholesome baked goods to comforting savory dishes. I can’t wait to see what you whip up! Read More...

grocery lists

Shop My Grocery Downloads

Do you head to the grocery store and feel overwhelmed with all of the options? Well, I've created FIVE downloadable and printable grocery lists from five different and popular grocery stores. All of my absolute must haves from Whole Foods, Target, a regular grocer, Trader Joe's, and Costco!

Shop Now

Popular Posts

chickpea brownie on a tray

Chickpea Brownies

bite out of healthy cookie dough ball

Healthy Cookie Dough Balls

cauliflower wings on plate

Buffalo Cauliflower Wings

pouring syrup on stack of oatmeal blender pancakes

Oatmeal Blender Pancakes

Trending Recipes

avocado corn salad

Summer Avocado Corn Salad

cilantro lime shrimp on plate

Cilantro Lime Shrimp with Coconut Cauliflower Rice

paleo cookie skillet with ice cream

Healthy Cookie Skillet

banana bread muffin on a rack

Paleo Banana Bread Muffins

Featured On

good housekeeping logo
parade logo
feed feed logo
business insider logo
everyday health logo
country living logo
bar desserts
truffles
bar desserts
bar desserts
muffins
vanilla birthday cake with chocolate icing

Get latest updates To your inbox!

Back to Top
© 2026 Erin Lives Whole
  • Privacy Policy
Site Credits Designed by Melissa Rose Design Developed by Once Coupled
healthy lemon cookies
healthy lemon cookies