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A cross between a dessert and a nutritious breakfast, these healthy pumpkin muffins are completely gluten-free! The fresh pumpkin puree and chocolate chips elevate these muffins to icon status.

Sweet healthy pumpkin muffins
These healthy pumpkin muffins are the perfect things to make for a fall snack, portable breakfast, or autumn brunch. They are sweet while not wreaking havoc on your blood sugar.
These muffins are never going to let you down. I mean, you will know they are going to be perfect right away because the pumpkin batter is fluffy and thick. You can tell that when you are pouring them into your muffin tin, these will be the softest pumpkin muffins you have ever had!
I think these pumpkin muffins rival the ones from Dunkin’ – while being better for you at the same time. These are perfectly soft, full of pumpkin spice, fluffy, and just so freaking good that you will want to eat them for breakfast every single day.

Ingredients in these pumpkin oat muffins
The ingredients in these muffins are the best because they are simple and most likely ones that you already have on hand in your pantry. Baking can be really easy if you allow it to be!
I love to use recipes that don’t require fancy ingredients or anything that you wouldn’t already have at home. All you really need for these muffins:
- Oat Flour– Oats are a heart-healthy whole grain. You’ll need 2 cups of oat flour.
- Pumpkin Puree – Either use fresh pumpkin puree from your Jack-O-Lantern or add some from a can, but either way, use 1 cup.
- Maple Syrup – Sweeten the muffins naturally with 1/3 a cup of real maple syrup.
- Eggs – These are an emulsifier, so you’ll use 2 large eggs.
- Coconut Oil – or Other Oil of Choice – Melt 1/2 a cup of your favorite type of healthy oil.
- Baking Soda + Powder – Combine 1 teaspoon of baking powder with 1/2 a teaspoon of baking soda for the fluffiest muffins.
- Vanilla – Pure vanilla extract adds deeper and richer flavors to the muffins, use one teaspoon.
- Pumpkin Pie Spice – Use some premade pumpkin pie spice to really make them taste amazing – about two teaspoons.
- Chocolate Chips – These chocolate chips are optional. If you want to use them, add about one cup.

Kitchen tools required
You don’t need any fancy kitchen gadgets to make this simple pumpkin muffin recipe. Grab the following tools before you begin.
- Muffin Tin
- Muffin Liners
- Large Bowl
- Whisk
- Small Bowl
- Wooden Spoon
For measuring, you will need 1 cup, 1/2 cup, 1/3 cup, 1 teaspoon, and 1/2 teaspoon.

How to make the best pumpkin muffins
These best-ever healthy pumpkin muffins are so easy to make. You’ll want to start by making homemade oat flour which is way easier than it sounds. No fancy mills or grinding machines here, all you need is a blender!
Just throw some oats into a blender and pulse for 10 seconds or so until your oats are finely ground into flour.
Tip: Always measure the amount of oats you need after grinding your oats up because the measurement can change.
If you already have oat flour, you can skip this step and move directly to mixing the pumpkin muffin batter.
Put the oat flour aside and whisk together your eggs, oil, pumpkin, maple syrup, and vanilla until well combined.
Mix the oat flour, baking powder, baking soda, salt, and cinnamon in another bowl.
Add the dry ingredients into the wet ingredients and stir until completely combined. Then add in any mix-ins you want! I love adding chocolate chips or pecans to my pumpkin muffins. I even save some to put on top!
Pour batter into a lined and greased muffin tin, top with a little extra chocolate and crushed nuts if desired, and bake! Bake them until you insert a toothpick into the middle, and it comes out clean.

Recipe Tips
Here are some questions people often ask about making pumpkin muffins. If you don’t see your question in this list, please leave it in the comments.
What other ingredients can I add to these oat flour pumpkin muffins?
You could add some cocoa powder to the muffins to make chocolate pumpkin muffins. Instead of chocolate chips, use white chocolate chips.
Should I make my own homemade oat powder?
This is entirely up to you. Some people like to make their own oat powder by pureeing rolled oats because it is less processed. It could be cheaper to make your own oat powder, especially if you buy rolled oats in bulk.
Can I turn this into a loaf of quick bread?
Yes, you can easily place the batter into a prepared loaf pan and make healthy pumpkin bread. You will have to adjust the baking time because it will take longer for the bread to bake.
Are these pumpkin muffins keto-friendly?
No, these muffins are not good to eat on a low-carb diet. The oat flour makes them much too high in carbs. Plus, the maple syrup increase that number even more. I suggest looking for a muffin recipe that uses either almond flour or coconut flour and is sweetened with a sugar substitute.
Storing leftovers
Storing muffins is simple. We like to let our muffins sit at room temperature in a sealed Tupperware container for up to four days. After that, we will do one of two things to ensure that they are stored properly – store them in the freezer or the refrigerator.
Freeze the muffins
Once cooled, wrap them up individually in plastic wrap and place them in a gallon Ziploc bag. This makes it easier to pull them out individually. Store them in the freezer for up to 6 months. When you are ready to eat them again, just let them thaw naturally in the refrigerator overnight.
Refrigerate them
This will increase the shelf life to longer than four days. Just stick the sealed, airtight container right into your fridge, and you will be good to go! These muffins will last about a week in the refrigerator.
If you liked this recipe, you’ll want to try these!
If you make this recipe, be sure to comment below and let me know how it was! Also tag @erinliveswhole on Instagram and use the hashtag #erinliveswhole so I can see it and feature you!

If you tried this recipe or any other recipes on my blog, please leave a 🌟 star rating and let me know how it went in the 📝 comments below. Follow @erinliveswhole on Instagram and tag me in any of the recipes you make so I can repost them!
The Best Healthy Pumpkin Muffins
Healthy pumpkin muffins are easy to make and made totally gluten free with certified gluten free oatmeal, fresh pumpkin puree, and a handful of chocolate chips! Toddlers, kids, teenagers, and adults all love these for a simple snack!
Ingredients
- 1 cup pumpkin puree
- 1/2 cup coconut oil, melted
- 2 eggs
- 1/3 cup maple syrup
- 1 tsp vanilla
- 2 cups oat flour , loosely scooped, not packed. gluten-free if necessary. see notes for homemade.
- 1 tsp baking powder
- 1/2 tsp baking soda
- 1/2 tsp salt
- 2 tsp pumpkin pie spice
- Optional: chocolate chips /chopped pecans – about 1 cup.
Instructions
- Preheat oven to 350F and line a muffin tin with liners and nonstick spray.
- In a large bowl, whisk pumpkin, coconut oil, eggs, maple syrup, and vanilla until well combined.
- In a small bowl, mix oat flour, baking powder, baking soda, salt and pumpkin pie spice.
- Add dry ingredients to wet and stir until combined. Stir in any mix-ins.
- Scoop into muffin tin and bake for about 22 minutes or until toothpick inserted comes out clean.
- Enjoy!
Notes
Make homemade oat flour by grinding oatmeal until very fine in a blender, measuring after blended.
There may be affiliate links in this post! By purchasing a product I recommend, I may receive a small compensation. However, I only recommend products I absolutely love and use myself. Thank you for supporting Erin Lives Whole, it helps keep this blog afloat 🙂





Katherine says
Just made these today and they are SO good! I added grated zucchini for fun just to see how they would turn out and it worked really well!
Erin says
Hi Katherine, thank you so much for your kind words!! I am so happy you enjoyed them and made it your own!
Seana Vitoff says
Do you think this recipe would work with just plain all-purpose flour?
Erin says
Hi Seana, yes, you can use a different flour. Before you bake just be sure to check the ratio because some flours are not a 1:1 ratio. Let me know what flour you use and how it comes out!
Alexia Lynch says
SO good, so moist! I have made them 3 times throughout the past 3 weeks.
Erin says
Hi Alexia, thanks for your kind words! I am so happy they’re part of your weekly baking routine!!
Jennaleigh says
These were amazingly delicious!!! I substituted almond flour for oat flour (1:1 ratio) and they came out perfectly! I also added about a cup of walnuts and a cup of chocolate chips to them too. I was planning on freezing them so they don’t go bad buuuuuuut I don’t think they’re going to make it to the freezer…haha!! YUM!!
Erin says
Hi Jennaleigh, thank you for your kind words!! I am so happy you enjoyed them and made them your own!
Kelly says
OMG these are incredible! I made them exactly as written, but subbed dried cranberries for the chocolate chips. About to make a 2nd batch!
Erin says
Hi Kelly, I am so happy you enjoyed them and made them your own! 🙂
Jean says
Absolutely Delicious!
Erin says
Glad you liked them Jean! Thanks for sharing!
Erin says
Hi Jean! I am so happy you liked them!!
Gwen says
Thanks for the recipe. These look great. Seems I can get away with making healthy muffins as long as I add the chocolate. Makes perfect sense to me;)
Erin says
Exactly 😉
Josi says
What size can of pumpkin?
Erin says
You only need one cup! I suggest scooping from a 15oz can.
Polly says
I made these and substituted avocado for coconut oil and unsweetened applesauce for eggs. Best healthy muffins I’ve made!! They were moist and delicious!
Erin says
That makes me so happy Polly! Glad you like them.
Andrea says
Can I give this 10 stars? My picky 6 year old loves these! Sub half the vanilla for maple extract and they are divine! We also add white chocolate chips and use avocado oil instead of coconut oil.
Will make these again and again!!
Erin says
Hi Andrea, so glad you both loved them so much and made them your own! 🙂
Ginny says
Delicious, but definitely not a pour-able texture. The texture was more of a cookie batter, so I made chocolate chip pumpkin balls instead! I appreciate the limited amount of ingredients because less is better 🙂 I’m not an expert baker, but I assume in order to make this batter more like cake batter, you’d have to add more liquid ingredients.
Erin says
Could be the brand of oats or how much you packed your cup full! So glad you still made it work!!
Katrina Miller says
Do you know the calories and nutrition value
Erin says
Hi Katrina, yes, please see above for the nutritional value. Hope you enjoy the muffins!
Camille Lloyd says
I live in Colorado so I am high in altitude. Can you suggest something to add or change to the recipes for a more successful bake? I find when I follow a lot of your recipes they take a lot longer to cook. I’m wondering if I should increase my name temperature? Thanks!
Erin says
Raise your oven temperature by 20-25 degrees. I would just keep an eye on it!
Mackenzie Gilbert says
I’m thinking of doing this recipe as a loaf… think it will work?
Erin says
Yes! it definitely will.
Tara says
Made these tonight and subbed a mashed overripe banana for the eggs (vegan!) They came out delicioussss. Thanks for the recipe!!
Erin says
Love that the banana worked!! Enjoy!
Jamie says
Hi Erin,
I love this recipe for its simplicity and great taste. i have made these muffins twice already! I am struggling with the texture – my batter is definitely not pourable and the muffins are more dense than fluffy. I can’t figure out what I am doing wrong. They still tase great tho ?
Erin says
If could be due to the brand of oats you use. Also – loosely scoop the oats, you don’t want them to be packed! Not pourable is ok- I actually use a cookie scoop to get it into muffins. But they should be fluffy! I shared on my Instagram stories and ‘recipe highlight’ how I make them if you would like to see.
I’ve also changed the amount of oat flour to 2 cups instead of 2 1/4. Try again and let me know!
Ioanna says
I made these yesterday and the taste was very good I literally had some of the batter before even baking them lol, but they weren’t fluffy they came out harder than I expected. Any suggestions as to what I can do next time?
Erin says
I’m sorry to hear that! I would check to make sure your baking powder + baking soda are fresh and not expired. I’m not sure why else they would be hard!!
Erin L says
Could you use honey instead of maple syrup? And if so would it be the same amount?
Thanks!
Erin says
Yes! Same amount will work.
Kelsey says
Made this in load form and subbed flax eggs and it was delicious!
Erin says
Hi Kelsey, ah I am so happy you made it your own!
Kristen says
Could I substitute almond flour or another paleo flour for the oat flour?
Erin says
This recipe is particular to oat flour, but I will be posting a pumpkin recipe with almond flour soon! 🙂
Tori says
Can I subsitute whole wheat flour?
Erin says
I haven’t personally tested it but you definitely can!
Erin says
If could be due to the brand of oats you use. Also – loosely scoop the oats, you don’t want them to be packed! Not pourable is ok- I actually use a cookie scoop to get it into muffins. But they should be fluffy! I shared on my Instagram stories and ‘recipe highlight’ how I make them if you would like to see.
Jena says
I substituted almond flour and they are absolutely delicious! Great recipe!
Erin says
Hi Jena, so glad you loved them! 🙂
Angelica Weber says
I used baby oatmeal instead of oat for, and did an oil swap, I used sunflower oil.
They are in the oven right now, so fingers crossed they taste as good as they smell. I will trash you on social media after I try them!
Erin says
Hi Angelica, love that you made them your own! How did they come out?
Angelica Weber says
They came out delicious
(And I’m sorry for the previous typos)
Erin says
Hi Angelica, no worries and glad you loved them!!
kaylee says
Could you sub the coconut oil with avocado oil?
Erin says
Yes! Great swap!
Alexandra says
could i substitute coconut flour?
Erin says
You could try, but I haven’t tested.
Katie says
Hello,
Does the nutrition information include the choc chips that are optional?
Erin says
Hi Katie, no it does not include them.